Istituto di Chimica del Riconoscimento Molecolare – C.N.R.

PUBBLICAZIONI 2011

Modulo ”Applicazioni sintetiche della biocatalisi” (PM.P03.003.001)

Responsabile: Dott. Gianluca OTTOLINA

1 C. Navarra, M. Marzorati, B. Danieli, S. Riva Chemoenzymatic synthesis of fluorescent and coloured polyesters Chem. Cat. Chem., 3: 331-337 (2011) (I.F. 3.345)

2 M.M. Cruz Silva, J.F. Carvalho, S. Riva, M.L. Sa e Melo Biocatalytic tranformations of steroids: focus on hydrolase-catalyzed reactions Curr. Org. Chem., 15: 928-941, (2011) (I.F. 2.920)

3 E. Borsini, G. Broggini, G. Colombo, M. Khansaa, A. Fasana, S. Galli, D. Passarella, E. Riva, S. Riva

Enantiopure 2-piperidylacetaldehyde as a useful building block in the diversity-oriented synthesis of polycyclic piperidine derivatives Tetrahedron-Asymmetry, 22: 264-269, (2011) (I.F. 2.484)

4 K. Purchartovà, P. Marhol, R. Gazak, D. Monti, S. Riva, M. Kuzma, V. Kren Regioselective alcoholysis of silybin A and B acetates with lipases J. Mol. Catal. B-Enzym., 71: 119-123, (2011) (I.F. 2.330)

5 D. Monti, G. Ottolina, G. Carrea, S. Riva

Redox reactions catalyzed by isolated enzymes Chem. Rev., 111: 4111-4140, (2011) (I.F. 36.438)

6 P. Bojarovà, K. Slamovà, K. Krened, R. Gazak, N. Kulik, R. Ettrich, H. Pelantovà, M. Kuzma, S. Riva, D. Adàmek, K. Bezouska, V. Kren Charged hexosaminides ad new substrate for β-N-Acetylhexosaminidase-catalyzed synthesis of immunomodulatory disaccharides Adv. Synth. Catal., 353: 2409-2420, (2011) (I.F. 5.250)

7 C. Dolle, P. Magrone, S. Riva, M. Ambrosi, E. Fratini, N. Peruzzi, P. Lo Nostro Symmetric and asymmeteric bolaamphiphiles from ascorbic acid J. Phys. Chem. B., 115: 11638-11649 (2011) (I.F. 3.603)

8 F. Secundo, S. Fialà, M.W. Fraaije, G. de Gonzalo, M. Meli, F. Zambianchi, G. Ottolina

Effects of water miscibile organic solvents on the activity and conformation of the Baeyer-Villiger monooxygenases from Thermobifida fusca and Acinetobacter calcoaceticus: a comparative study. Biotechnol. Bioeng., 108: 491 499, (2011) (I.F. 3.700)

9 B. Uhnakova, R. Ludwig, J. Peknicova, L. Homolka, L. Lisà, M. Sulc, A. Petrickova, F. Elzeinovà, H.

Pelantovà, D. Monti, V. Kren, D. Haltrich, L. Martinkovà Biodegradation of tetrabromobisphenol A by oxidases in basidiomycetous fungi and estrogenic activity of the biotransformation products. Bioresource Technol., 102: 9409-9415, (2011) (I.F. 4.365)

10 M. Vittorini, E. Dumitriu, G. Barletta, F. Secundo

Immobilization of Thermoanaerobium brockii alcohl dehydrogenase on SBA-15 Bioprocess. Biosyst. Eng., 247-251, (2011) (I.F. 2.060)

11 E. Brenna, F.G. Gatti, A. Manfredi, D. Monti, F. Parmeggiani Biocatalyzed enantioselective reduction of activated C=C Bonds: synthesis of enantiomerically enriched α-Halo-β-arylpropionic acids Eur. J. Org. Chem., 4015-4022, (2011) (I.F. 3.206)

12 S. Serra

Lipase-mediated resolution of substituted 2-aryl-propanols: application to the enantioselective synthesis of phenolic sesquiterpenes Tetrahedron-Asymmetry, 22: 619-628, (2011) (I.F. 2.484)

13 E. Brenna, C. Fuganti, F.G. Gatti, S. Serra Biocatalytic methods for the synthesis of enantioenriched odor active compounds Chem. Rev., 111: 4036-4072, (2011) (I.F. 36.438)

14 D. Tessaro, L. Cerioli, S. Servi, F. Viani, P. D’Arrigo

L-Amino acid amides via dynamic kinetic resolution Adv. Synth. Catal., 353: 2333-2338, (2011) (I.F. 5.250)

15 F. Secundo, G. Roda, M. Vittorini, A. Ungureanu, B. Dragoic , E. Dumitriu

Effect of chemical composition of SBA-15 on the adsorption and catalytic activity of α-chymotrypsin J. Mater. Chem., 21, 15619-15628, (2011). (I.F. 5.101)

16 S. Serra, I. Nobile

Chemoenzymatic preparation of the p-menth-1,5-dien-9-ol stereoisomers and their use in the enantiospecific synthesis of natural p-menthane monoterpenes. Tetrahedron- Asymmetry, 22: 1455–1463, (2011). (I.F. 2.484)

17 E. Brenna, G. Fronza, C. Fuganti, D. Monti, F. Parmeggiani

Enantioselective C=C bond reduction of unsaturated α-chloro esters by old yellow enzymes J. Mol. Catal. B-Enzym., 73: 17-21, (2011) (I.F. 2.330)

18 M. Lavazza, C. Formantici, V. Langella, D. Monti, U. Pfeiffer, Y. M. Galante

Oxidation of galactomannan by laccase plus TEMPO yields an elastic gel J. Biotechnol., 156: 108-116, (2011) (I.F. 2.970)

19 P. D'Arrigo, D. Arosio, L. Cerioli, D. Moscatelli, S. Servi, F. Viani, D. Tessaro

Base catalyzed racemization of amino acid derivatives Tetrahedron- Asymmetry, 22: 851-856, (2011) (I.F. 2.484)

20 L. Magagnin, P. Cojocaru, A. Raygani, D. Brivio, F. Secundo, A. Turolla, G. Ottolina.

Galvanic displacement of nanostructured gold for flavoenzyme adsorption in biotechnology ECS Trans., 33: 59-66 (2011) (no I.F.)

21 F. Volontè, I. Pisanelli, P. D'Arrigo, F. Viani, G. Molla, S. Servi, L. Pollegioni

Overexpression of a bacterial chymotrypsin: application for L-amino acid ester hydrolysis Enz. Microb. Technol., 49: 560-566, (2011) (I.F. 2.287)

Modulo ” Trasformazioni biocatalizzate di materiali di origine vegetale”

(PM.P03.004.004) Responsabile: Dott. Gianluca OTTOLINA

22 P. Gavezzotti, C. Navarra, S. Caufin, B. Danieli, P. Magrone, D. Monti, S. Riva Synthesis of enantiomerically enriched dimers of vinylphenols by tandem action of laccases and lipases

Adv. Synth. Catal., 353: 2421-2430, (2011) (I.F. 5.250)

Modulo ”Sintesi di materiali funzionali e sviluppo di sistemi analitici miniaturizzati”

(PM.P06.003.001) Responsabile: Dott.ssa Marcella CHIARI

23 M. Cretich, A. Reddington, M. Monroe, M. Bagnati F. Damin, L. Sola, M. Selim Unlu, M. Chiari

Silicon biochips for dual label-free and fluorescence detection: application to protein microarray development Biosens. Bioelectron., 26: 3938-3943, (2011) (I.F. 5.361)

24 C. Pereira, A. Yalcin, M. Cretich, M. Chiari, M.S. Unlu,

Synergetic chemiluminescence and label-free dual detection for developing a hepatitis protein array J. Immunol. Methods, 371: 159-164 (2011) (I.F. 2.340)

25 C.A. Lopez, G.G. Daaboul, S. Ahn, A.P. Reddington, M.R. Monroe, X. Zhang, R.J. Irani, C. Yu, C.A.

Genco, M. Cretich, M. Chiari, B.B. Goldberg, J.H. Connor, M.S. Unlu Biomolecular detection employing the interferometic reflectance imaging sensor (IRIS)

Jove, DOI:1033791/2694 (2011) (No I.F.) 26 M. Cretich , M. Bagnati, F. Damin, L. Sola, M. Chiari

Overcoming mass-transport limitations to achieve femtomolar detection limits on silicon protein microarrays. Anal. Biochem. 418: 164-166 (2011) (IF 3.236)

Modulo “Simulazioni molecolari di sistemi biologici” (INT.P02.001.001)

Responsabile: Dott. Giorgio COLOMBO 27 L. Croci, V. Barilli, D. Chia, L. Massimino, R. van Vugt, R. Longhi, P. Rotwein, G.G. Consalez.

Local insulin-like growth factor I expression is essential for Purkinje neurone survival at birth Cell Death Differ., 18: 48-59 (2011) (I.F. 9.050)

28 P. Lusso, L. Vangelista, R. Cimbro, M. Secchi, F. Sironi, R. Longhi, M. Faiella, O. Maglio, V. Pavone

Molecular engineering of Rantes peptide mimetics with potent anti-HIV-1 activity Faseb J., 25: 1230-1243 (2011) (I.F. 6.515)

29 C. Casinici., G. Volpe, K.Crotta, C. Panuzzo, D.Lattuada, C.A. Cabras, R.Longhi, G. Saglio

Characterization of a monoclonal antibody specific for novel Bcr/Abl out-of-frame fusion proteins Hybridoma, 30: Issue3, (2011) (I.F. 0.462)

30 S. Burastero , B., Frigerio, L. Lopalco, F. Sironi, D. Breda , R.Longhi, G.Scarlatti , S. Canevari, M:

Figini, P. Lusso Broad-spectrum inhibition of HIV-1 by a monoclonal antibody directed against a gp 120-induced epitope of CD4 Plos One, 6: Issue 7 e22081, (2011) (I.F. 4.411)

31 M. Meli, M. Gasset, G. Colombo Dynamic diagnosis of familial prion diseases supports the β2-αd2 loop as universal interference target Plos One, 6: e19093 (2011) (I.F. 4.411)

32 L. Mollica, G. Morra, G. Colombo, G. Musco HMGB1-Carbenoxolone interactions: dynamics insight from combined nuclear magnetic resonance and molecular dynamics Chem. Asian. J., 6: 1171-1180, (2011) (I.F. 4.188)

33 J. Nasica-Labouze, M. Meli, P. Derreumaux, G. Colombo, N. Mousseau

A multiscale approach to characterize the early aggregation steps of the amyloid-forming peptide GNNQQNY from the yeast prion Sup-35 Plos Comput. Biol., 7: e1002051, (2011) (I.F. 5.515)

34 L. Pucci, G. Grazioso, C. Dallanoce, L. Rizzi, C. DeMicheli, F. Clementi, S. Bertrand, D. Bertrand, R.

Longhi, C. DeAmici Engineering of α-conotoxin MII-derived peptides with increased selectivity for native α6β2* nicotinic

acetylcholine receptors Faseb J., 25: 3775-3789 (2011) (I.F. 6.515)

Modulo ”Targeting e inibizione dell'angiogenesi per la terapia anti-cancro” (PM.P01.021.004)

Responsabile: Dott. Matteo ZANDA

35 S. Shankar, M. Sani, F.R. Saunders, H.M. Wallace, M. Zanda Total synthesis and cytotoxicity evaluation of an oxazole analogue of tubulysin U Synlett, 12: 1673-1676, (2011) (I.F. 2.447)

36 G. Pinna, M.C. Bellucci, L. Malpezzi, L. Pisani, S. Superchi, A. Volonterio, M. Zanda

An umpolung sulfoxide reagent for use as functionalized benzyl carbanion equivalent Tetrahedron, 67: 52638-5281, (2011) (I.F. 3.011)

37 A. F. Haag, M. Baloban, M. Sani, B. Kerscher, O. Pierre, A. Farkas, R. Longhi, E. Boncompagni, D.

He´rouart, S. Dall’Angelo, E. Kondorosi, M. Zanda, P. Mergaert, G. P. Ferguson Protection of Sinorhizobium against host cysteine-rich antimicrobial peptides is critical for symbiosis”. PLoS Biology, 9: e1001169, (2011) (I.F. 12.472)

38 E. Maccaroni, W. Panzeri, L. Malpezzi

Calcium acamprosate: a triclinic polymorph Acta Crystallogr. E (I.F. 0,413)

Modulo”Modellistica molecolare di proteine legate a processi patologici”

(PM.P01.026.002) Responsabile: Dott.ssa Maria Cristina DE ROSA

39 D. Pirolli, C. Carelli Alinovi, E. Capoluongo, M.A. Satta, P. Concolino, B. Giardina, M.C. De Rosa.

Insight into a novel p53 single point mutation (G389E) by molecular dynamics simulations Int. J. Mol. Sci., 12: 128-140 (2011) (I.F. 2.279)

40 M.C. De Rosa, D. Pirolli, M. Bozzi, F. Sciandra, B. Giardina, A. Brancaccio

A second Ig-like domain identified in dystroglycan by molecular modelling and dynamics J. Mol. Graph. Model, 29: 1015-1024, (2011) (I.F. 2.038)

41 A. Waite, M.C. De Rosa, A. Brancaccio, D.J. Blake

A gain-of-glycosylation mutation associated with myoclonus-dystonia syndrome affects trafficking and processing of mouse ε-sarcoglycan in the late secretory pathway.

Hum Mutat. 32: 1246-58, (2011) (I.F. 5.956) 42 F. Sciandra, E. Pavoni, G. Tasca, R. Tittarelli, M. Bozzi, B. Giardina, E. Ricci, A. Brancaccio

An immunological analysis of dystroglycan subunits: lessons learned from a small cohort of non-congenital dystrophic patients.

Open Neurol. J. 5, 68-74, (2011) (I.F. nd) 43 F. Pirozzi, F.R.Di Raimo, G. Zanni, E. Bertini, P. Billuart, T. Tartaglione, E. Tabolacci, A. Brancaccio,

G. Neri, P. Chiurazzi, Insertion of 16 aminoacids in the BAR domain of the oligophrenin 1 protein causes mental retardation and cerebellar hypoplasia in an Italian family. Hum Mutat. 32: E2294-307, (2011) (I.F. 5.956)

Modulo”Proteomica salivare” (PM.P06.008.002)

Responsabile: Dott. Alessandro LUPI

44 G. Nocca, R. Ragno, V. Carbone, G.E. Martorana, D.V. Rossetti, G. Gambarini, B. Giardina, A. Lupi Identification of glutathione-methacrylates adducts in gingival fibrobalsts and erythrocytes by HPLC-MS and capillary electrophoresis Dent. Mater., 27: e87-e98, (2011) (I.F. 2.453)

45 G. Gambarini, G. Plotino, N.M. Grande, G. Nocca, A. Lupi, B. Giardina, M. De Luca, L. Testarelli In vitro evaluation of the cytotoxicity of FotoSan ™ light-activated disifection of human fibroblasto Med. Sci. Monitor, 17: MT21-MT25, (2011) (I.F. 2.453)

46 M. Castagnola, R. Inzitari, C. Fanali, F. Iavarone, A. Vitali, C. Desiderio, G. Vento, C. Tirone, C.

Romagnoli, T. Cabras, B. Manconi, M.T. Sanna, R. Boi, E. Pisano, C.W. Heizmann, G. Faa, I. Messana The surprising composition of the salivary proteome of preterm human newborn Mol. Cell. Proteomics, 10: M10.003467, (2011) (I.F. 8.354)

47 M. Castagnola, T. Cabras, A. Vitali, M.T. Sanna, I. Messana

Biotechnological implications of the salivary proteome Trends Biotechnol., 29: 409-418 (2011) (I.F. 9.644)

48 G. Gambarini, L. Testarelli, D. Al-Sudani, G. Plotino, N. M. Grande, A. Lupi, B. Giardina, G. Nocca,

M. De Luca In vitro evaluation of the cytotoxicity of different root canal filling materials The Open Dentistry Journal, 5: 29-32, (2011). No I.F.

Modulo “Meccanismi di regolazione metabolica negli eritrociti di organismi polari”

(TA.P02.036.001) Responsabile: Prof. Bruno GIARDINA

49 O Andersen ., M.C. De Rosa, D.Pirolli, A.Tooming-Klunderud , P.E.Petersen , C.Andrè. Polymorphism, selection and tandem duplication of transferrin genes in Atlantic cod (Gadus morhua) – Conserved synteny between fish monolobal and tetrapod bilobal transferrin loci BMC Genet., 12: 151, (2011) (I.F. 2.489)