Dovetail TreeOfLife Vector corrected · 2021. 5. 27. · 068 Coffee (Coffea arabica) 120 Soybean...

111 Cat (Felis)

269 Pig (Sus)

6Gb

N50Input

Chicago

® + HiRise

™

Doveta

il™ H

i-C +

HiRise™

Genome Size

Monocots

Dicots

Molluscs

Arthropods

Echinoderms

Fish

Bryophytes

Cnidarians

Poriferans

AcoelsPlatyhelminths

Annelids

Amphibians

Reptiles

Birds

Mammals

BasidiomycetesAscomycetes

Nematodes

Hemichordates

Choanoflagellates

Rhodophytes

OomycetesTrypanosomes

Plants

Animals

Fungi

Protists205 Potato Late Blight Pathogen (Phytophthora infestans)

113 Ash Tree (Fraxinus excelsior)245 Chia (Salvia hispanica)

165 Alfalfa (Medicago sativa)

043 Rapeseed (Brassica napus)

007 Black Seed Grass (Alloteropsis semialata)

042 Brachypodium (Brachypodium hybridum)

003 Kiwi (Actinidia melanandra)

140 Barley (Hordeum vulgare)

300 Maize (Zea diploperennis)

098 Durian (Durio zibethinus)

038 Sugar Beet (Beta vulgaris)

220 Kerguelen Cabbage (Pringlea antiscorbutica)

255 White Mustard (Sinapis alba)

258 Tomato (Solanum lycopersicum)

074 Common Hazel (Corylus avellana)

291 Muscadine (Vitis rotundifolia)

266 Fibrous Dropseed (Sporobolus stapfianus)

227 Kudzu (Pueraria montana var lobata)

023 Alpine Rock Cress (Arabis alpina)

053 Shepherd's Purse (Capsella bursapastoris)

259 Tomato (Solanum lycopersicum)

123 Cotton (Gossypium herbaceum)014 Cashew (Anacardium occidentale)

082 Globe Artichoke (Cynara cardunculus)

050 Small Seed False Flax (Camelina microcarpa)


070 Coffee (Coffea arabica)

115 Bonfire Moss (Funaria hygrometrica)


241 Heritage Raspberry (Rubus idaeus)

294 Grape Vine (Vitis vinifera Sauvignon Blanc)

209 Pistachio (Pistacia integerrima)

005 Onion (Allium cepa)

252 Coffeeweed (Senna occidentalis)

125 Cotton (Gossypium turneri)

190 Pachycladon exilis (Pachycladon exilis)

278 Wheat Chromosome 7 (Triticum aestivum)

282 Blueberry (Vaccinium corymbosum)

292 Grape Vine (Vitis vinifera Cabernet Sauvignon)

208 Pistachio (Pistacia atlantica)

077 Tropical Spiral Ginger (Costus pulverulentus)

064 Chrysanthemum (Chrysanthemum seticuspe)

024 Peanut Ancestor (Arachis duranensis)

108 Weeping Lovegrass (Eragrostis curvula)

147 Persian Walnut (Juglans regia)

034 Oat (Avena eriantha)

075 Common Hazel (Corylus avellana)


120 Soybean (Glycine max)

270 Tortula Moss (Syntrichia caninervis)

188 African Rice (Oryza glaberrima)

149 Lettuce (Lactuca sativa)


248 Daisy Tree (Scalesia gordillo)

202 Downy Mildew (Peronosclerospora sorghi)

112 Strawberry (Fragaria ananassa)

161 Cassava (Manihot esculenta)

251 Meadow Spikemoss (Selaginella apoda)

025 Peanut (Arachis ipaensis)

210 Pistachio (Pistacia vera)

238 Blackberry (Rubus)

283 Blueberry (Vaccinium corymbosum)

126 Red Alga (Gracilaria vermiculophylla)

063 Quinoa (Chenopodium quinoa)

301 Maize (Zea mays ssp Mexicana)

009 Ragweed (Ambrosia artemisiifolia)

257 Potato (Solanum bulbocastanum)

141 Barley (Hordeum vulgare)

289 Cowpea (Vigna unguiculata)

039 Downy Birch (Betula pubescens)

212 Ribwort Plantain (Plantago lanceolata)

127 Violet (Haberlea rhodopensis)

037 Sugar Beet (Beta vulgaris)

061 Hornwort (Ceratophyllum demersum)

240 Raspberry (Rubus)

223 Almond (Prunus dulcis)

166 Barrel Medick (Medicago truncatula)

044 Black Mustard (Brassica nigra)

008 Alder (Alnus glutinosa)

239 Raspberry (Rubus)

277 Wheat (Triticum aestivum)

265 Giant Rats Tail Grass (Sporobolus pyramidalis)

129 Prairie Sunflower (Helianthus petiolaris)

051 Small Seed False Flax Tetraploid (Camelina microcarpa)

067 Coconut (Cocos nucifera)

178 East African Highland Banana (Musa acuminata)

146 Trumpet Tree (Jacaranda copaia)

134 Rubber Tree (Hevea brasiliensis)

211 Pistachio (Pistacia vera)

279 Parasitic Euglenoid (Trypanosoma cruzi)

290 Cowpea (Vigna unguiculata)

059 Chinese Chestnut (Castanea mollissima)

199 Crevice Pestemon (Penstemon petiolatus)

095 Snow Whitlow Grass (Draba nivalis)

124 Cotton (Gossypium longicalyx)

293 Grape Vine (Vitis vinifera Cabernet Franc)

261 Prairie Cordgrass (Spartina pectinata)

285 Veronica (Veronica panormitana)

135 Goldeye (Hiodon alosoides)

195 Common House Spider (Parasteatoda tepidariorum)

158 Tarnished Plant Bug (Lygus lineolaris)

081 Southern House Mosquito (Culex quinquefasciatus)

004 Pea Aphid (Acyrthosiphon pisum)

041 Cattle (Bos taurus)

242 Bakers Yeast (Saccharomyces cerevisiae)

056 Trevally (Caranx ignobilis)

027 Antarctic Fur Seal (Arctocephalus gazella)

256 Rice Weevil (Sitophilus oryzae)

106 Donkey (Equus asinus)

012 Midas Cichlid Fish (Amphilophus citrinellus)

136 Halibut (Hippoglossus hippoglossus)

119 Masai Giraffe (Giraffa camelopardalis tippelskirchi)

152 Little Skate (Leucoraja erinacea)

092 Sumatran Rhinoceros (Dicerorhinus sumatrensis)

085 Monarch Butterfly (Danaus plexippus)

156 Sheep Blowfly strain LA07 (Lucilia cuprina cuprina)

099 Rock boring Urchin (Echinometra lucunter)

002 Elkhorn Coral (Acropora palmata)

228 Mountain Lion (Puma concolor)

175 Mouse (Mus musculus)

031 Common Checkered Whiptail (Aspidoscelis tesselatus)032 Western Whiptail (Aspidoscelis tigris)

254 Eastern Bluebird (Sialia sialis)

203 Lamprey (Petromyzon marinus)

110 Liver Fluke (Fasciola hepatica)

163 Spotted Jelly (Mastigias papua)

094 East African Black Rhino (Diceros bicornis michaeli)

076 Rattail (Coryphaenoides brevibarbis)

213 European Flounder (Platichthys flesus)

200 Yellow Perch (Perca flavescens)

086 Water Flea (Daphnia obtusa)

216 Weedy Coral (Pocillopora damicornis)

065 Bank Vole (Clethrionomys glareolus)

047 Elephant Shark (Callorhinchus milii)

058 Leaf Sponge (Carteriospongia foliascens)

026 Giant Squid (Architeuthis dux)

132 Red Pine Cone Beetle (Henosepilachna niponica)

096 Emu (Dromaius novaehollandiae)

101 Saw Scaled Viper (Echis coloratus)

281 Greater Prairie Chicken (Tympanuchus cupido)

236 Cane Toad (Rhinella marina)

268 Meerkat (Suricata suricatta)

080 Cat Flea (Ctenocephalides felis)

262 Tuatara (Sphenodon punctatus)

160 Diamondback Terrapin (Malaclemys terrapin)

247 Tasmanian Devil (Sarcophilus harrisii)

010 Axolotl (Ambystoma mexicanum)

264 Fall Armyworm (Spodoptera frugiperda)

022 Florida Scrub Jay (Aphelocoma coerulescens)

073 Danish Tumbler (Columba livia)

118 Water Strider (Gerris buenoi)

139 Human (Homo sapiens)

020 Baja Pronghorn (Antilocapra americana peninsularis)

184 Blue Tilapia (Oreochromis aureus)

271 Yellow Mealworm (Tenebrio molitor)

181 American Pika (Ochotona princeps)

029 Texas Spotted Whiptail (Aspidoscelis gularis)

016 Mallard (Anas platyrhynchos)

083 Colugo (Cynocephalus)

159 Charcoal Rot (Macrophomina phaseolina)

295 Marsabit Clawed Frog (Xenopus borealis)

148 Dark eyed Junco (Junco hyemalis)

046 Common Marmoset (Callithrix jacchus)

089 Mountain Pine Beetle (Dendroctonus ponderosae)

221 Northern Sea Robin (Prionotus carolinus)

263 Great Hammerhead Shark (Sphyrna mokarran)

088 Daphnia (Daphnia pulicaria)

194 Purple Sea Urchin (Paracentrotus lividus)

275 Stick Insect (Timema cristinae)

299 Californian Sea Lion (Zalophus californianus)

298 Highland Swordtail (Xiphophorus malinche)

204 Desert Horned Lizard (Phrynosoma platyrhinos)

155 African Elephant (Loxodonta africana)

097 Fruit Fly (Drosophila serrata)

171 White Bass (Morone chrysops)

035 Blue Whale (Balaenoptera musculus)

072 Northern Bobwhite (Colinus virginianus)

176 Mouse (Mus musculus)

162 Pangolin (Manis tricuspis)

071 Northern Bobwhite (Colinus virginianus)

237 Lesser Grain Borer (Rhyzopertha dominica)

133 Soybean Cyst Nematode (Heterodera glycines)

198 Western Spadefoot (Pelobates cultripes)

100 Tenrec (Echinops telfairi)

036 Gall Wasp (Belonocnema treatae)

276 Malayan Lesser Chevrotain (Tragulus javanicus ravus)

182 Rainbow Trout (Oncorhynchus mykiss)

267 Mexican Musk Turtle (Staurotypus triporcatus)

052 Dog (Canis lupus familiaris)

153 Angler (Lophius piscatorius)

013 Sponge (Amphimedon queenslandica)

015 Laysan Duck (Anas laysanensis)

143 Capybara (Hydrochoerus hydrochaeris)

079 Rattlesnake (Crotalus viridis viridis)

249 Eastern Fence Lizard (Sceloporus undulatus)

170 Water Strider (Microvelia longipes)

187 Gemsbok (Oryx gazella)

105 Donkey (Equus asinus)

201 White footed Mouse (Peromyscus leucopus)

272 Demosponge (Tethya wilhelma)

078 Saltwater Crocodile (Crocodylus porosus)

222 South African Rock Hyrax (Procavia capensis capensis)

142 Hydra (Hydra)

168 Atlantic Silverside (Menidia menidia)

250 Planarian (Schmidtea mediterranea)

192 Lion (Panthera leo)

231 Caribou (Rangifer tarandus)

151 Japanese Lamprey (Lethenteron japonicum)

040 Cattle (Bos indicus)

234 Apple Maggot (Rhagoletis pomonella)

030 Little Striped Whiptail (Aspidoscelis inornatus)

224 Sea Goldie (Pseudanthias squamipinnis)

169 European common vole (Microtus arvalis)

186 Platypus (Ornithorhynchus anatinus)

191 Western Chimpanzee (Pan troglodytes verus)

197 Band tailed Pigeon (Patagioenas fasciata)

006 Bathynellacea (Allobathynella bangokensis)

253 Amberjack (Seriola rivoliana)

179 Greater Mouse eared Bat (Myotis myotis)

174 North Indian Muntjac (Muntiacus muntjak vaginalis)

137 African River Hippo (Hippopotamus amphibius)

060 Chacoan Peccary (Catagonus wagneri)

218 Guppy (Poecilia reticulata)

128 Red Abalone (Haliotis rufescens)

104 Grass Endophytic Fungus (Epichloe elymi)

229 Black headed Bulbul (Pycnonotus atriceps)

180 Round Goby (Neogobius melanostomus)

297 Swordless Swordtail (Xiphophorus birchmanni)

102 California Sea Otter (Enhydra lutris)

087 Water Flea (Daphnia pulex)

121 Powdery Mildew (Golovinomyces orontii isolate MGH)

144 13-lined Ground Squirrel (Ictidomys tridecemlineatus)

296 African Clawed Frog (Xenopus laevis)

260 Hispaniolan Solenodon (Solenodon paradoxus)

274 Tidepool Copepod (Tigriopus californicus)

246 Tufted Capuchin (Sapajus apella)

230 African Bullfrog (Pyxicephalus adspersus)

183 Mountainous Star Coral (Orbicella faveolata)

280 Common Bottlenose Dolphin (Tursiops truncatus)

287 Western Yellowjacket (Vespula pensylvanica)

103 Geometer Moth (Eois olivacea)

066 Atlantic Herring (Clupea harengus)

017 Hawaiian Duck (Anas wyvilliana)

167 Song Sparrow (Melospiza melodia)

173 Siberian Musk Deer (Moschus moschiferus moschiferus)

049 Anna's Hummingbird (Calypte anna)

215 Indian mealmoth (Plodia interpunctella)

214 Melissa Blue (Plebejus melissa)

107 Horse (Equus caballus)

164 Acoel Worm (Meara stichopi)

233 African Striped Mouse (Rhabdomys pumilio)

284 Komodo Dragon (Varanus komodoensis)

048 Nicobar Pigeon (Caloenas nicobarica)

109 Woolly Apple Aphid (Eriosoma lanigerum)

157 Halmahera Paradise crow (Lycocorax pyrrhopterus)

145 Deer Tick (Ixodes scapularis)

177 Mouse DBA2 (Mus Musculus)

033 Tube Snout (Aulorhynchus flavidus)

185 Nile tilapia (Oreochromis niloticus)

196 Sand Flea (Parhyale hawaiensis)

189 Marsh Rice Rat (Oryzomys palustris)

219 Northern Paper Wasp (Polistes fuscatus)

011 Bowfin (Amia calva)

028 New Mexico Whiptail (Aspidoscelis neomexicanus)

131 Leech (Helobdella austinensis)

235 White breasted Antbird (Rhegmatorhina hoffmannsi)

021 Spiny Softshell Turtle (Apalone spinifera)

172 Striped bass (Morone saxatilis)

093 Black Rhino (Diceros bicornis)

057 White Shark (Carcharodon carcharias)

288 Alpaca (Vicugna pacos)

090 Common Vampire Bat (Desmodus rotundus)

116 Greater Wax Moth (Galleria mellonella)

193 Eastern Tiger Swallowtail (Papilio glaucus)

091 Asian Citrus Psyllid (Diaphorina citri)

045 Nematode (Caenorhabditis brenneri)

273 Kauai Long Jawed Spider (Tetragnatha kauaiensis)

084 Pupfish (Cyprinodon brontotheroides)

062 Fat tailed Dwarf Lemur (Cheirogaleus medius)

138 Lobster (Homarus americanus)

019 Boll Weevil (Anthonomus grandis)

117 Western Mosquitofish (Gambusia affinis)

207 Purple Seastar (Pisaster ochraceus)

001 Spiny Mouse (Acomys cahirinus)

114 Chaffinch (Fringilla coelebs)

232 Rat (Rattus rattus)

286 Verticillium Wilt (Verticillium longisporum)

243 Sydney Rock Oyster (Saccostrea glomerata)

122 Desert Tortoise (Gopherus agassizii)

154 Cassia Crossbill (Loxia sinesciurus)

018 Hispaniolan Trunk Anole (Anolis distichus)

206 Green veined White (Pieris napi abisko)

150 Mourning Gecko (Lepidodactylus lugubris)217 Common Wall Lizard (Podarcis muralis)

130 Tobacco Budworm (Heliothis virescens)

244 Choanoflagellate (Salpingoeca rosetta)226 Leaf Rust (Puccinia triticina)

225 Acorn Worm (Ptychodera flava)

0 100Mb 200Mb3Gb 150Mb

Tree ID # Common Name Genus and Species NCBI TaxID Tree ID Acknowledgement (Name, Institution)Genome Size

(Mbp)

Input

Scaffold N50 (Mbp)

Chicago® + HiRise™

Scaffold N50 (Mbp)

Dovetail™ Hi-C + HiRise™

Scaffold N50 (Mbp)

1 Spiny Mouse Acomys cahirinus 10068001 Spiny Mouse (Acomys cahirinus)

William Barbazuk, University of Florida 2500 0.77 N/A 126.868

2 Elkhorn Coral Acropora palmata 6131002 Elkhorn Coral (Acropora palmata)

Iliana Baums, Sheila Kitchen, Nicole Fogarty and Webb Miller, Pennsylvania State University

390 0.28 0.787 6.82

3 Kiwi Actinidia melanandra 165713003 Kiwi (Actinidia

melanandra)

Maren Wellenreuther (Auckland University, The New Zealand Institute for Plant & Food Research Limited), Zac Hanley (The New Zealand Institute for Plant & Food Research Limited)

758 0.02 0.394 10.682

4 Pea Aphid Acyrthosiphon pisum 7029004 Pea Aphid (Acyrthosiphon pisum) Nancy Moran, University of Texas at Austin

510 0.52 0.185 132.545

5 Onion Allium cepa 4679 005 Onion (Allium cepa) Richard Finkers, Wageningen UR 16000 0.06 0.436 N/A

6 BathynellaceaAllobathynella

bangokensis1898115

006 Bathynellacea (Allobathynella bangokensis) Do not mention customer or contact name 200 0.01 0.178 N/A

7 Black Seed GrassAlloteropsis

semialata435756

007 Black Seed Grass

(Alloteropsis semialata)Luke Dunning, University of Sheffield 1000 0.18 0.522 N/A

8 Alder Alnus glutinosa 3517 008 Alder (Alnus glutinosa) Jarkko T Salojärvi, University of Helsinki 440 0.15 N/A 8.508

9 RagweedAmbrosia

artemisiifolia4212

009 Ragweed (Ambrosia

artemisiifolia)

Tom Gilbert (Natural History Museum of Denmark), and Mike Martin (University of Copenhagen)

1420 0.03 0.522 N/A

10 AxolotlAmbystoma

mexicanum8296

010 Axolotl (Ambystoma

mexicanum)

Jeramiah Smith, Stowers Institute for Medical Research 32000 0.03 0.22 N/A

11 Bowfin Amia calva 7924 011 Bowfin (Amia calva)

Ingo Braasch (Michigan State, project leader) Andrew W. Thompson (Michigan State) Solomon David(Nicholls State University) Allyse Ferrara (NichollsState University) GenoFish Consortium

1000 0.02 11.7 41.164

12 Midas Cichlid FishAmphilophus

citrinellus61819

012 Midas Cichlid Fish

(Amphilophus citrinellus)Frederico Henning, University of Konstanz 845 0.96 1.273 N/A

13 SpongeAmphimedon

queenslandica400682

013 Sponge (Amphimedon queenslandica)

Sandie Degnan and Bernie Degnan, The University of Queensland 166 0.12 0.95 N/A

14 CashewAnacardium

occidentale171929

014 Cashew (Anacardium

occidentale)

Orzenil da Silva, Brazilian Agricultural Research Corporation 377 1.43 3.8 N/A

15 Laysan Duck Anas laysanensis 75850015 Laysan Duck (Anas

laysanensis)Philip Lavretsky, University of Texas 1000 0.07 0.761 N/A

16 Mallard Anas platyrhynchos 8839016 Mallard (Anas

platyrhynchos)Philip Lavretsky, University of Texas 1000 0.07 2.759 N/A

17 Hawaiian Duck Anas wyvilliana 500303017 Hawaiian Duck (Anas

wyvilliana)Philip Lavretsky, University of Texas 1000 0.07 8.035 N/A

18 Hispaniolan Trunk Anole Anolis distichus 38893018 Hispaniolan Trunk Anole (Anolis distichus) Richard Glor, University of Kansas 3500 0.02 21.64 N/A

19 Boll Weevil Anthonomus grandis 7044019 Boll Weevil (Anthonomus grandis)

Fabricio Arraes, EMBRAPA 841 0.02 0.878 23.2

20 Baja Pronghorn

Antilocapra

americana

peninsularis

1497538

020 Baja Pronghorn

(Antilocapra americana

peninsularis)

Harris Lewin, UC Davis 3000 0.07 24.008 N/A

21 Spiny Softshell Turtle Apalone spinifera 55534021 Spiny Softshell Turtle

(Apalone spinifera)Nicole Valenzuela, Iowa State University 2700 0.02 50.794 125.895

22 Florida Scrub JayAphelocoma

coerulescens39617

022 Florida Scrub Jay (Aphelocoma coerulescens) Nancy Chen, Cornell University 1200 7.66 15.305 74.351

23 Alpine Rock Cress Arabis alpina 50452023 Alpine Rock Cress (Arabis alpina)

Korbinian Schneeberger, Max Planck Institute for Plant Breeding Research Cologne

337 0.91 1.53 N/A

24 Peanut Arachis duranensis 130453024 Peanut Ancestor (Arachis duranensis) David Bertioli, University of Georgia 1100 0.95 0.513 N/A

25 Peanut Arachis ipaensis 130454 025 Peanut (Arachis ipaensis) David Bertioli, University of Georgia 1100 0.136 0.436 N/A

26 Giant Squid Architeuthis dux 256136026 Giant Squid (Architeuthis dux) Tom Gilbert, Natural History Museum of Denmark

2673 0.03 4.853 N/A


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

27 Antarctic Fur Seal Arctocephalus gazella 37190027 Antarctic Fur Seal

(Arctocephalus gazella)Joe Hoffman, Bielefeld University 3000 6.21 N/A 139.182

28 New Mexico WhiptailAspidoscelis

neomexicanus212526

028 New Mexico Whiptail (Aspidoscelis neomexicanus)

Peter Baumann, Stowers Institute for Medical Research 1600 0.04 38.583 107.969

29 Texas Spotted Whiptail Aspidoscelis gularis 68351029 Texas Spotted Whiptail (Aspidoscelis gularis)

Peter Baumann, Stowers Institute for Medical Research 1498 0.05 40.14 N/A

30 Little Striped WhiptailAspidoscelis

inornatus68352

030 Little Striped Whiptail (Aspidoscelis inornatus)


31Common Checkered

Whiptail

Aspidoscelis

tesselatus1842987

031 Common Checkered

Whiptail (Aspidoscelis

tesselatus)

Peter Baumann, Stowers Institute for Medical Research 3136 0.041 21.105 106.987

32 Western Whiptail Aspidoscelis tigris 52180032 Western Whiptail

(Aspidoscelis tigris)


33 Tube Snout Aulorhynchus flavidus 240152033 Tube Snout (Aulorhynchus flavidus)

Sam Yeaman, University of Calgary 500 1.69 3.22 18.04

34 Oat Avena eriantha 146534 034 Oat (Avena eriantha)Jessica Schlueter Eric N Jellen Peter J Maughan Cory Brouwer Tim Langdon 4000 1.39 2.368 534.822

35 Blue WhaleBalaenoptera

musculus9771

035 Blue Whale (Balaenoptera musculus) Yury Bukhman, Morgridge Institute for Research3000 6.16 N/A 110.996

36 Gall Wasp Belonocnema treatae 1159321036 Gall Wasp (Belonocnema treatae)

Jennifer Drummond, Rice University 1400 0.02 4.5 151

37 Sugar Beet Beta vulgaris 161934 037 Sugar Beet (Beta vulgaris) Mitch McGrath, USDA 1000 12.51 4.596 61.792

38 Sugar beet Beta vulgaris 161934 038 Sugar Beet (Beta vulgaris) Mitch McGrath, USDA 1000 1.4 2.9 59.9

39 Downy Birch Betula pubescens 38787039 Downy Birch (Betula

pubescens)Jarkko T Salojärvi, University of Helsinki 880 0.09 0.436 0.525

40 Cattle Bos indicus 9915 040 Cattle (Bos indicus) Elizabeth Ross, University of Queensland 3000 11.15 41.886 62.25

41 Cattle Bos taurus 9913 041 Cattle (Bos taurus) Juan Medrano, UC Davis 3000 12 N/A 104

42 BrachypodiumBrachypodium

hybridum1071398

042 Brachypodium

(Brachypodium hybridum)John Vogel, Smithsonian Institution 514 2.63 15.08 N/A

43 Rapeseed Brassica napus 3708043 Rapeseed (Brassica

napus)Richard Michelmore, UC Davis 1130 38.83 N/A 73.998

44 Black Mustard Brassica nigra 3710044 Black Mustard (Brassica nigra)

Andrew Sharpe, Isobel Parkin, GIFS 600 0.29 0.605 44.582

45 NematodeCaenorhabditis

brenneri135651

045 Nematode

(Caenorhabditis brenneri)Joanna Buchthal, MIT 190 0.38 0.85 21.836

46 Common Marmoset Callithrix jacchus 9483046 Common Marmoset

(Callithrix jacchus)Ricardo del Rosario, Broad Inst. 3000 0.1 12.4 115.3

47 Elephant Shark Callorhinchus milii 7868047 Elephant Shark

(Callorhinchus milii)

Byrappa Venkatesh, Institute of Molecular and Cell Biology, A*STAR 1021 1.17 4.649 N/A

48 Nicobar Pigeon Caloenas nicobarica 187106048 Nicobar Pigeon (Caloenas nicobarica) Beth Shapiro, University of California, Santa Cruz

1000 0.17 20.9 N/A

49 Annas Hummingbird Calypte anna 9244049 Anna's Hummingbird

(Calypte anna)Erich Jarvis, Duke University 1000 0.05 23.58 N/A

50 Small Seed False Flax Camelina microcarpa 71324050 Small Seed False Flax (Camelina microcarpa)

Isobel Parkin, Agriculture and Agri-Food Canada250 7.91 8.739 29.061

51Small Seed False Flax

tetraploidCamelina microcarpa 71324

051 Small Seed False Flax Tetraploid (Camelina microcarpa)


52 Dog Canis lupus familiaris

9615052 Dog (Canis

lupus familiaris)Harris Lewin, UC Davis 2499 0.19 20.4 N/A

53 Shepherds PurseCapsella

bursapastoris3719

053 Shepherd's Purse

(Capsella bursapastoris)

Felix Bemm, Max Planck Institute for Developmental Biology 220 4.74 N/A 7.909


bursapastoris3719





bursapastoris3719





(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

56 Trevally Caranx ignobilis 376895 056 Trevally (Caranx ignobilis)

Maren Wellenreuther (Auckland University, The New Zealand Institute for Plant & Food Research Limited), Zac Hanley (The New Zealand Institute for Plant & Food Research Limited)

687 0.52 14.798 25.279

57 White SharkCarcharodon

carcharias13397

057 White Shark (Carcharodon carcharias)

Gavin J. Naylor, Florida Museum of Natural History 5000 0.03 4.03 144.4

58 Leaf SpongeCarteriospongia

foliascens593584

058 Leaf Sponge (Carteriospongia foliascens)

James Bell and Nicole Webster, Victoria University Wellington 1000 0.01 0.194 0.675

59 Chinese Chestnut Castanea mollissima 60419059 Chinese Chestnut

(Castanea mollissima)

John E. Carlson, Pennsylvania State University Margaret Staton, University of Tennessee Tatyana Zhebentyayeva, Pennsylvania State University Albert Abbott, Pennsylvania State University and University of Kentucky C. Dana Nelson, USDA Forest Service and University of Kentucky Thomas Swale, Dovetail Genomics Company Jared Westbrook, The American Chestnut Foundation

800 0.02 2.1 42.963

60 Chacoan Peccary Catagonus wagneri 51154060 Chacoan Peccary

(Catagonus wagneri)Harris Lewin, UC Davis 3000 0.09 36.887 N/A

61 HornwortCeratophyllum

demersum4428

061 Hornwort (Ceratophyllum demersum) Peter Szovenyi, University of Zurich 120 0.297 0.649 30.598

62 Fat tailed Dwarf Lemur Cheirogaleus medius 9460062 Fat tailed Dwarf Lemur (Cheirogaleus medius)

Rachel C. Williams and Anne D. Yoder, Duke University 2700 0.04 50.63 N/A

63 Quinoa Chenopodium quinoa 63459063 Quinoa (Chenopodium quinoa) Nature volume 542, pages 307?312 (16 February

2017) 1400 1.66 5.36 N/A

64 ChrysanthemumChrysanthemum

seticuspe1111766

064 Chrysanthemum (Chrysanthemum seticuspe) Customer requested anonymity 3000 0.24 0.387 8.542

65 Bank VoleClethrionomys

glareolus447135

065 Bank Vole (Clethrionomys glareolus)No contact name 3000 0.04 23.226 98.461

66 Atlantic Herring Clupea harengus 7950066 Atlantic Herring (Clupea harengus) Leif Anderrson and Mats Petterson, Uppsala

University 948.73 0.78 27.73 N/A

67 Coconut Cocos nucifera 13894 067 Coconut (Cocos nucifera)Darlon Lantican and Hayde Galvez (University of the Philippines Los Baños) 2700 0.12 0.56 N/A

68 Coffee Coffea arabica 13443 068 Coffee (Coffea arabica) The Arabica Coffee Genome Consortium 1000 0.28 N/A 32.74

69 Coffee Coffea arabica 13443 069 Coffee (Coffea arabica) Juan Medrano, UC Davis 670 1.5 1.91 N/A

70 Coffee Coffea arabica 13443 070 Coffee (Coffea arabica) The Arabica Coffee Genome Consortium 550 0.76 N/A 45.84

71 Northern Bobwhite Colinus virginianus 9014071 Northern Bobwhite

(Colinus virginianus)

Brant C. Faircloth, Louisiana State University1100 0.18 15.531 66.87

72 Northern Bobwhite Colinus virginianus 9014072 Northern Bobwhite

(Colinus virginianus)Brant Faircloth, Louisiana State University 1100 0.11136 15.531 66.871

73 Danish Tumbler Columba livia 8932073 Danish Tumbler (Columba livia)

Tom Gilbert, University of Copenhagen 1111 3.15 14.2 N/A

74 Common Hazel Corylus avellana 13451074 Common Hazel (Corylus avellana) Shawn Mehlenbacher and Kelly Vining, Oregon

State University 385 1.03 N/A 49.826

75 Hazelnut Corylus avellana 13451075 Common Hazel (Corylus avellana) Stuart Lucas, Richard Buggs, Nihal Öztolan

Erol 500 0.01 0.149 18.363

76 RattailCoryphaenoides

brevibarbis473302

076 Rattail (Coryphaenoides brevibarbis) Rus Hoelzel-Durham University 1000 0.02 0.084 N/A

77 Tropical Spiral Ginger Costus pulverulentus 160685077 Tropical Spiral Ginger

(Costus pulverulentus)Doug Schemske, MSU 1467 0.03 1.044 47.481

78 Saltwater Crocodile Crocodylus porosus 8502078 Saltwater Crocodile

(Crocodylus porosus)

Travis Glenn (University of Georgia, Athens), David Ray (Texas Tech University), & Ed Green (University of California, Santa Cruz)

3000 0.21 0 17.7

79 Rattlesnake Crotalus viridis viridis 8742079 Rattlesnake (Crotalus

viridis viridis)Todd Castoe, University of Texas Arlington 1300 0.14 2.472 179.898

80 Cat Flea Ctenocephalides felis 7515080 Cat Flea (Ctenocephalides felis) Timothy Driscoll (West Virginia University), Joseph J.

Gillespie (University of Maryland) 465 0.06 1.075 71.714


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

81 Southern House MosquitoCulex

quinquefasciatus7176

081 Southern House Mosquito (Culex quinquefasciatus) Joanna Buchthal, MIT 580 0.79 1.428 280.33

82 Globe Artichoke Cynara cardunculus 4265082 Globe Artichoke (Cynara cardunculus)

Sergio Lanteri, University of Turin http://www.artichokegenome.unito.it). 1000 0.13 N/A 44.8

83 Colugo Cynocephalus 30657 083 Colugo (Cynocephalus) Harris Lewin, UC Davis 3000 0.04 10.14 N/A

84 PupfishCyprinodon

brontotheroides1987526

084 Pupfish (Cyprinodon

brontotheroides)Chris Martin, UNC 1000 0.29 0.591 40.223

85 Monarch Butterfly Danaus plexippus 13037085 Monarch Butterfly (Danaus

plexippus)

Peter Andolfatto and Jamie Walters, Princeton University 249 0.72 6.019 9.21

86 Water Flea Daphnia obtusa 35527086 Water Flea (Daphnia obtusa)

Michael Lynch, Arizona State University 200 0.03 0.222 6.061

87 Water Flea Daphnia pulex 6669087 Water Flea (Daphnia pulex) Michael Pfrender, Galvin Life Science Center

156 0.49 2.07 N/A

88 Daphnia Daphnia pulicaria 35523 088 Daphnia (Daphnia pulicaria) Joseph R. Shaw, Indiana University 210 0.52 0.451 14.078

89 Mountain Pine BeetleDendroctonus

ponderosae77166

089 Mountain Pine Beetle (Dendroctonus ponderosae)

Felix Sperling, University of Alberta Funded by http://tria-net.srv.ualberta.ca 204 0.47 2.8 18.6

90 Common Vampire Bat Desmodus rotundus 9430090 Common Vampire Bat (Desmodus rotundus)

Mendoza, et. al., Nature Ecology & Evolution volume 2, pages 659-668 (2018) 2000 5.5 27 N/A

91 Asian Citrus Psyllid Diaphorina citri 121845091 Asian Citrus Psyllid

(Diaphorina citri)

Prashant S. Hosmani 1, Mirella Flores-Gonzalez 1, Wayne B. Hunter 2, Susan Brown 3, Lukas A. Mueller 1 and Surya Saha 1 1 Boyce Thompson Institute, Ithaca, NY 14853; 2 USDA-ARS, U.S. Horticultural Research Laboratory, Fort Pierce, FL 34945 3 Division of Biology, Kansas State University, Manhattan, KS 66506

500 0.38 N/A 26.686

92 Sumatran RhinocerosDicerorhinus

sumatrensis89632

092 Sumatran Rhinoceros

(Dicerorhinus sumatrensis)

Ollie Ryder, University of California San Diego3000 0.95 23.8 65.4

93 Black Rhino Diceros bicornis 9805093 Black Rhino (Diceros

bicornis)

Love Dalen, Swedish Museum of Natural History3000 16.2 28.5 N/A

94 East African Black RhinoDiceros bicornis

michaeli310714

094 East African Black Rhino (Diceros bicornis michaeli) Harris Lewin, UC Davis 3000 0.12 18.308 N/A

95 Snow Whitlow Grass Draba nivalis 171823095 Snow Whitlow Grass

(Draba nivalis)

Michael Nowak, Natural History Museum, University of Oslo 300 0.02 2.27 N/A

96 EmuDromaius

novaehollandiae8790

096 Emu (Dromaius

novaehollandiae)

Qi Zhou (Zhejiang University) and De-shou (Southwest University) 1000 9.67 11.308 N/A

97 Fruit Fly Drosophila serrata 7274097 Fruit Fly (Drosophila

serrata)

Steve Chenoweth, University of Queensland 198 0.94 N/A 30.327

98 Durian Durio zibethinus 66656 098 Durian (Durio zibethinus)Nature Genetics Vol. 49, No. 11, Nov. 2017

800 0.6 2.986 22.72

99 Rock boring Urchin Echinometra lucunter 105361099 Rock boring Urchin

(Echinometra lucunter)

Carlos Prada (University of Rhode Island and Smithsonian Tropical Research Institute)

900 0.25 0.464 28.785

100 Tenrec Echinops telfairi 9371 100 Tenrec (Echinops telfairi) Harris Lewin, UC Davis 3000 45.77 60.391 N/A

101 Saw scaled Viper Echis coloratus 64175101 Saw Scaled Viper (Echis coloratus)

John Mulley, Bangor University 1300 0.02 27.2 N/A

102 California Sea Otter Enhydra lutris 34882102 California Sea Otter

(Enhydra lutris)Bob Wayne, UCLA 2889 0.02 6.6 N/A

103 Moth Eois olivacea 873491103 Geometer Moth (Eois

olivacea)

Thomas L. Parchman (University of Nevada), Lee Dyer 500 0.01 2.604 17.632

104 Fungus Epichloe elymi 55200104 Grass Endophytic Fungus (Epichloe elymi) Murray Cox, Massey University 35 0.03 0.24 N/A

105 Donkey Equus asinus 582580 105 Donkey (Equus asinus) Albano Beja-Pereira, University of Porto 3000 7.97 N/A 86.006

106 Donkey Equus asinus 9793 106 Donkey (Equus asinus)Ludo Orlando, Natural History Museum of Denmark

2320 0.43 15.1 N/A

107 Horse Equus caballus 9796 107 Horse (Equus caballus)Ted Kalbfleisch, Medical College of South Carolina

2608 0.76 7.98 N/A


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

108 Weeping Lovegrass Eragrostis curvula 38414108 Weeping Lovegrass

(Eragrostis curvula)

Mario Caccamo (NIAB), José Carballo (CERZOS), Bruno Santos (NIAB), Emidio Albertini (University of Perugia) 620 0.38 0.791 43.411

109 Woolly Apple Aphid Eriosoma lanigerum 133082109 Woolly Apple Aphid

(Eriosoma lanigerum)

Paul Nabity, University of California-Riverside230 2 3.449 29.96

110 Liver Fluke Fasciola hepatica 6192110 Liver Fluke (Fasciola

hepatica)Steve Paterson, University of Liverpool 1300 0.2 0.49 N/A

111 Cat Felis 9682 111 Cat (Felis) No species name or contact name 2700 18.07 67.83 143.051

112 Strawberry Fragaria ananassa 3746112 Strawberry (Fragaria

ananassa)Pat Edger (MSU), Steve Knapp (UC Davis) 5200 5.98 2.915 25.189

113 Ash Tree Fraxinus excelsior 38873113 Ash Tree (Fraxinus

excelsior)

Richard Buggs, Laura Kelly, Endymion Cooper, Meg Staton, Jennifer Koch, David Carey, Josiah Seaman, John Carlson 880 0.02 0.935 27.2

114 Chaffinch Fringilla coelebs 37598114 Chaffinch (Fringilla

coelebs)

Borja Mila, National Museum of Natural Sciences1000 0.08 8.032 68.853

115 Bonfire Moss Funaria hygrometrica 29583115 Bonfire Moss (Funaria hygrometrica) Peter Szovenyi, University of Zurich 400 0.09 0.63 10.506

116 Greater Wax Moth Galleria mellonella 7137116 Greater Wax Moth

(Galleria mellonella)

Bernarda Calla and May Berenbaum, University of Illinois Urbana-Champaign 500 0.03 0.033 8.486

117 Western Mosquitofish Gambusia affinis 33528117 Western Mosquitofish (Gambusia affinis)

Sandra L. Hoffberg et. al., G3: GENES, GENOMES, GENETICS Early online April 27, 2018; https://doi.org/10.1534/g3.118.200101

600 0.03 6.65 N/A

118 Water Strider Gerris buenoi 56086118 Water Strider (Gerris

buenoi)Abderrahman Khila, CNRS 500 0.34 1.902 2.219

119 Masai Giraffe

Giraffa

camelopardalis

tippelskirchi

439328119 Masai Giraffe (Giraffa camelopardalis tippelskirchi) Harris Lewin, UC Davis 3000 3 57.205 N/A

120 Soybean Glycine max 3847 120 Soybean (Glycine max)Min Xie and Hon-Ming Lam, The Chinese University of Hong Kong 1100 2.02 N/A 48.459

121 Powdery MildewGolovinomyces

orontii isolate MGH62715

121 Powdery Mildew (Golovinomyces orontii isolate MGH)

Jyoti Taneja, UC Berkeley 76 0.95 N/A 11.3

122 Desert Tortoise Gopherus agassizii 38772122 Desert Tortoise (Gopherus agassizii)

Greer Dolby, Arizona State University 2900 0.21 28.36 N/A

123 CottonGossypium

herbaceum34274

123 Cotton (Gossypium

herbaceum)Josh Udall, Brigham Young University 1203 0.09 0.386 N/A

124 Cotton Gossypium longicalyx 34280124 Cotton (Gossypium

longicalyx)Josh Udall, Brigham Young University 1196 28.88 23.861 95.878

125 Cotton Gossypium turneri 34284125 Cotton (Gossypium

turneri)Josh Udall, Brigham Young University 1980 6.27 N/A 60.445

126 Red AlgaGracilaria

vermiculophylla257814

126 Red Alga (Gracilaria

vermiculophylla)Erik Sotka, College of Charleston 200 0.01 0.303 2.062

127 Violet Haberlea rhodopensis 121482127 Violet (Haberlea

rhodopensis)BLANK 1500 0.33 N/A 0.149

128 Red Abalone Haliotis rufescens 6454128 Red Abalone (Haliotis

rufescens)Andrew Severin, Iowa State University 2000 0.59 1.9 N/A

129 Prairie Sunflower Helianthus petiolaris 4234129 Prairie Sunflower

(Helianthus petiolaris)John M. Burke, University of Georgia 3000 13.49 N/A 187.414

130 Tobacco Budworm Heliothis virescens 7102130 Tobacco Budworm

(Heliothis virescens)

Megan Fritz (University of Maryland), Fred Gould (North Carolina State University)

400 0.1 0.82 13.659

131 LeechHelobdella

austinensis1366558

131 Leech (Helobdella

austinensis)David Weisblat, Berkeley 228 0.02 5.126 N/A

132 Red Pine Cone BeetleHenosepilachna

niponica459490

132 Red Pine Cone Beetle

(Henosepilachna niponica)Kei W. Matsubayashi, Kyushu University 1000 0.01 3.836 N/A

133 Soybean Cyst Nematode Heterodera glycines 51029133 Soybean Cyst Nematode (Heterodera glycines) Andrew Severin, Iowa State University 100 0.3 0.437 11.216

134 Rubber Tree Hevea brasiliensis 3981134 Rubber Tree (Hevea

brasiliensis)

Nik Pootakham, National Center for Genetic Engineering and Biotechnology 1250 0.51 0.97 N/A

135 Goldeye Hiodon alosoides 54904135 Goldeye (Hiodon

alosoides)John Postlethwait, University of Oregon 800 0.07 5.55 28.166


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

136 HalibutHippoglossus

hippoglossus8267

136 Halibut (Hippoglossus

hippoglossus)

Carl-Johan Rubin, Uppsala University Don't share stats. 700 3.23 N/A 27.18

137 East African River HippoHippopotamus

amphibius kiboko575201

137 East African River Hippo (Hippopotamus amphibius kiboko)


138 Lobster Homarus americanus 6706138 Lobster (Homarus

americanus)BLANK 4000 0.02 0.908 13.672

139 Human Homo sapiens 9606 139 Human (Homo sapiens) Mike Snyder, Stanford University 3000 7.79 N/A 127.507

140 Barley Hordeum vulgare 4513 140 Barley (Hordeum vulgare) Nils Stein, IPK 5000 0.08 1.31 N/A

141 Barley Hordeum vulgare 4513 141 Barley (Hordeum vulgare)Miriam Schreiber, The James Hutton Institute

5000 0.09 4.144 N/A

142 Hydra Hydra 6083 142 Hydra (Hydra)

Rob Steele (University of California, Irvine), Oleg Simakov (Okinawa Institute of Science and Technology) 665 0.05 0.36 N/A

143 CapybaraHydrochoerus

hydrochaeris10149

143 Capybara (Hydrochoerus hydrochaeris)

Andrew Crawford, Universidad de los Andes3150 0.2 12.2 N/A

144 13 lined Ground SquirrelIctidomys

tridecemlineatus43179

144 13-lined Ground Squirrel (Ictidomys tridecemlineatus) BLANK 2500 BLANK N/A N/A

145 Deer Tick Ixodes scapularis 6945145 Deer Tick (Ixodes

scapularis)Monika Gulia-Nuss, University of Nevada 2100 0.08 0.419 48.591

146 Trumpet Tree Jacaranda copaia 228396146 Trumpet Tree (Jacaranda copaia) Brant C. Faircloth, Louisiana State University

1000 0.57 1.02 N/A

147 Persian Walnut Juglans regia 51240147 Persian Walnut (Juglans regia)

David Neale, UC Davis 650 1.61 N/A 32.655

148 Dark eyed Junco Junco hyemalis 40217148 Dark eyed Junco (Junco hyemalis)

Borja Mila, National Museum of Natural Sciences1200 0.1 16.736 71.317

149 Lettuce Lactuca sativa 4236 149 Lettuce (Lactuca sativa) Richard Michelmore, UC Davis 2500 0.48 7.87 295.139

150 Mourning GeckoLepidodactylus

lugubris47724

150 Mourning Gecko

(Lepidodactylus lugubris)

Matt Fujita & Sonal Singhal, University of Michigan2200 0.07 2.59 N/A

151 Japanese LampreyLethenteron

japonicum980415

151 Japanese Lamprey

(Lethenteron japonicum)

Byrappa Venkatesh, Institute of Molecular and Cell Biology, A*STAR 1600 0.6 1.09 N/A

152 Little Skate Leucoraja erinacea 7782152 Little Skate (Leucoraja erinacea)

José Luis Gómez-Skarmeta, CSIC/ Universidad Pablo de Olavide 4000 0.05 0.043 0.053

153 Angler Lophius piscatorius 8074153 Angler (Lophius

piscatorius)

Steinar Daae Johansen ([email protected]), Lars Martin Jakt ([email protected]) and Arseny Dubin ([email protected]), Nord University

800 0.1 9.023 32.801

154 Cassia Crossbill Loxia sinesciurus 64794154 Cassia Crossbill (Loxia sinesciurus)

Thomas L. Parchman (University of Nevada), Craig Benkman 1400 3.11 N/A 71.807

155 African Elephant Loxodonta africana 9785155 African Elephant

(Loxodonta africana)

Marc Tollis, PhD Lisa Abegglen, PhD Joshua Schiffman, MD Carlo Maley, PhD 3000 94.53 N/A 89.39

156 Sheep Blowfly strain LA07Lucilia cuprina

cuprina7375

156 Sheep Blowfly strain LA07 (Lucilia cuprina cuprina) Max Scott, NCSU 665 0.01 2.34 N/A

157 Halmahera Paradise crowLycocorax

pyrrhopterus681192

157 Halmahera Paradise crow (Lycocorax pyrrhopterus)

Alexander Suh, Uppsala University Hi-C assembly was done by Phase 1000 6.1 6.63 N/A

158 Tarnished Plant Bug Lygus lineolaris 50650158 Tarnished Plant Bug

(Lygus lineolaris)OP Perera, USDA 900 0.02 7.673 N/A

159 Charcoal RotMacrophomina

phaseolina35725

159 Charcoal Rot (Macrophomina phaseolina) Frank Martin, USDA 53 3.28 N/A 4.259

160 Diamondback Terrapin Malaclemys terrapin 8485160 Diamondback Terrapin (Malaclemys terrapin) Mihai Pop, UMCP 2500 0.44 5.354 141.626

161 Cassava Manihot esculenta 3983161 Cassava (Manihot

esculenta)

Alex Harkess, Donald Danforth Plant Science Center 800 4.6 N/A 58.013

162 Pangolin Manis tricuspis 358128 162 Pangolin (Manis tricuspis) Harris Lewin, UC Davis 3000 0.03 9.9 N/A

163 Spotted Jelly Mastigias papua 596313163 Spotted Jelly (Mastigias papua) Michael Dawson & Lauren Schiebelhut, UC Merced

236 0.016 0.537 N/A


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

164 Worm Meara stichopi 84115164 Acoel Worm (Meara

stichopi)Andi Hejnol, University of Bergen, Norway 1200 0.06 0.059 N/A

165 Alfalfa Medicago sativa 3879 165 Alfalfa (Medicago sativa)

Joann Mudge, Nicholas P. Devitt, Diego A. Fajardo, Thiru Ramaraj, Andrew D. Farmer, Xinbin Dai, Zhaohong Zhuang, Peng Zhou, Joseph Guhlin, Christopher D. Town, Maria J. Monteros, Patrick X. Zhao, Jason R. Miller, Kevin A.T. Silverstein, Nevin D. Young

800 0.27 1.27 N/A

166 Barrel Medick Medicago truncatula 3880166 Barrel Medick (Medicago truncatula)

Karen M. Moll, Peng Zhou, Thiruvarangan Ramaraj, Diego Fajardo, Nicholas P. Devitt, Michael J. Sadowsky, Robert M. Stupar, Peter Tiffin, Jason R. Miller, Nevin D. Young, Kevin A. T. Silverstein and Joann Mudge

400 6.48 6.82 N/A

167 Song Sparrow Melospiza melodia 44397167 Song Sparrow (Melospiza melodia)

Travis Glenn (University of Georgia, Athens) & Kevin Winker (University Alaska, Fairbanks)

970 0.03 5.38 N/A

168 Atlantic Silverside Menidia menidia 238744168 Atlantic Silverside

(Menidia menidia)

Nina Overgaard Therkildsen, Cornell University600 1.33 2.936 18.159

169 European common vole Microtus arvalis 47230169 European common vole (Microtus arvalis)

Laurent Excoffier, Gerald Heckel, University of Bern 3000 0.08 25.674 186.607

170 Water Strider Microvelia longipes 1101180170 Water Strider (Microvelia longipes)

Abderrahman Khila, CNRS 500 0.54 1.892 54.155

171 White Bass Morone chrysops 46259171 White Bass (Morone

chrysops)

Benjamin Reading, Linnea Andersen, Andrew Baltzegar, Jason Abernathy, and Adam Fuller

643 0.16 5.28 28.018

172 Striped bass Morone saxatilis 34816172 Striped bass (Morone

saxatilis)

Benjamin Reading, Linnea Andersen, Andrew Baltzegar, Jason Abernathy, and Adam Fuller

600 0.03 1.89 25.57

173 Siberian Musk DeerMoschus moschiferus

moschiferus68415

173 Siberian Musk Deer

(Moschus moschiferus

moschiferus)


174 North Indian MuntjacMuntiacus muntjak

vaginalis9887

174 North Indian Muntjac (Muntiacus muntjak vaginalis) Harris Lewin, UC Davis 3000 1.07 31.541 N/A

175 Mouse Mus musculus 10090 175 Mouse (Mus musculus)Thomas Keane, Wellcome Trust Sanger Institute

2581 0.39 24.089 N/A

176 Mouse Mus musculus 10090 176 Mouse (Mus musculus)Thomas Keane, Wellcome Trust Sanger Institute

2666 0.36 24.91 N/A

177 Mouse Mus Musculus 10090177 Mouse DBA2 (Mus

Musculus)

Robert W. Williams and David G. Ashbrook, University of Tennessee Health Science Center

2500 4.21 N/A 124.534

178East African Highland

BananaMusa acuminata 4641

178 East African Highland

Banana (Musa acuminata)

Jaroslav Dolezel, Institute of Experimental Botany1750 0.03 1.191 56.71

179 Greater Mouse eared Bat Myotis myotis 51298179 Greater Mouse eared Bat (Myotis myotis) Emma Teeling, University College Dublin 1880 0.05 23.2 N/A

180 Round GobyNeogobius

melanostomus47308

180 Round Goby (Neogobius melanostomus)

Jhonatan Sepulveda Villet, University of Wisconsin - Milwaukee 1000 0.13 N/A 0.162

181 American Pika Ochotona princeps 9978181 American Pika (Ochotona princeps) Mike Russello, University of British Columbia

3000 26.86 14.011 75.838

182 Rainbow Trout Oncorhynchus mykiss 8022182 Rainbow Trout

(Oncorhynchus mykiss)

Devon Pearse, University of California, Santa Cruz2178 1.67 3.14 N/A

183 Mountainous Star Coral Orbicella faveolata 48498183 Mountainous Star Coral (Orbicella faveolata)

Monica Medina, Pennsylvania State University500 0.06 1.08 N/A

184 Blue Tilapia Oreochromis aureus 47969184 Blue Tilapia (Oreochromis aureus) Qi Zhou (Zhejiang University) and De-shou Wang

(Southwest University) 1000 1.71 3.48 36.808

185 Nile tilapia Oreochromis niloticus 8128185 Nile tilapia (Oreochromis niloticus) Qi Zhou (Zhejiang University) and De-shou Wang

(Southwest University) 1000 2.52 3.94 40.814

186 PlatypusOrnithorhynchus

anatinus9258

186 Platypus (Ornithorhynchus anatinus) Hilary Martin, University of Oxford 2300 6.03 18.7 N/A

187 Gemsbok Oryx gazella 9958 187 Gemsbok (Oryx gazella) Harris Lewin, UC Davis 3000 1.48 47.027 N/A

188 African Rice Oryza glaberrima 4538188 African Rice (Oryza

glaberrima)

Rod A. Wing & Jianwei Zhang, Arizona Genomics Institute 350 15.13 N/A 26.425

189 Marsh Rice Rat Oryzomys palustris 37020189 Marsh Rice Rat (Oryzomys palustris)

Leah Reznikov, University of Florida 2000 0.04 41.341 105.862


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

190 Pachycladon exilis Pachycladon exilis 414718190 Pachycladon exilis

(Pachycladon exilis)

Jan Bartos, Institute of Experimental Botany AS CR 550 0.08 1.16 N/A

191 Western Chimpanzee Pan troglodytes verus 37012191 Western Chimpanzee (Pan troglodytes verus)

Tomas Marques-Bonet, Institut de Biologia Evolutiva 3349 0.72 26 N/A

192 Lion Panthera leo 9689 192 Lion (Panthera leo) Ellie Armstrong, Stanford University 2000 10.45 N/A 136.137

193 Eastern Tiger Swallowtail Papilio glaucus 45779193 Eastern Tiger Swallowtail (Papilio glaucus)

Peter Andolfatto and Jamie Walters, Princeton University 580 0.68 N/A 16.839

194 Purple Sea Urchin Paracentrotus lividus 7656194 Purple Sea Urchin

(Paracentrotus lividus)

Ferdinand Marletaz and Thierry Lepage, CNRS800 0.68 2.57 41.46

195 Common House SpiderParasteatoda

tepidariorum114398

195 Common House Spider (Parasteatoda tepidariorum)

Jonathan Coddington, Smithsonian Institution 1400 0.47 4.05 N/A

196 Sand Flea Parhyale hawaiensis 317513196 Sand Flea (Parhyale

hawaiensis)

Anastasios Pavlopoulos (Janelia Research), Michalis Averof (CNRS), Cassandra Extavour (Harvard), Nipam Patel (Berkeley)

3600 0.11 0.657 53.695

197 Band tailed Pigeon Patagioenas fasciata 372321197 Band tailed Pigeon

(Patagioenas fasciata)

Beth Shapiro, University of California, Santa Cruz1086 0.07 20 N/A

198 Western Spadefoot Pelobates cultripes 61616198 Western Spadefoot

(Pelobates cultripes)Ivan Gomez-Mestre, CSIC 3000 0.08 0.055 0.196

199 Crevice Pestemon Penstemon petiolatus 69923199 Crevice Pestemon

(Penstemon petiolatus)Andrea Wolfe, The Ohio State University 500 0.33 0.371 71.167

200 Yellow Perch Perca flavescens 8167200 Yellow Perch (Perca

flavescens)

Jhonatan Sepulveda Villet, University of Wisconsin - Milwaukee 1000 0.92 N/A 31.053

201 White footed Mouse Peromyscus leucopus 10041201 White footed Mouse

(Peromyscus leucopus)Joanna Buchthal, MIT 3000 0.05 11 N/A

202 Downy MildewPeronosclerospora

sorghi230839

202 Downy Mildew

(Peronosclerospora sorghi)Richard Michelmore, UC Davis 300 0.14 N/A 10.236

203 Lamprey Petromyzon marinus 7757203 Lamprey (Petromyzon marinus)

https://www.nature.com/articles/s41588-017-0036-11052 0.19 0.599 N/A

204 Desert Horned LizardPhrynosoma

platyrhinos52577

204 Desert Horned Lizard

(Phrynosoma platyrhinos)Tereza Jezkova, Miami University of Ohio 3000 0.01 63.431 273.213

205Potato Late Blight

Pathogen

Phytophthora

infestans4787

205 Potato Late Blight

Pathogen (Phytophthora

infestans)

Howard Judelson, Noble Research Institute, LLC 216 0.56 1.15 N/A

206 Green veined White Pieris napi abisko 78633206 Green veined White

(Pieris napi abisko)

Jason Hill, Chris Wheat, Stockholm University350 0.48 4.306 N/A

207 Purple Seastar Pisaster ochraceus 7612207 Purple Seastar (Pisaster ochraceus)

Michael Dawson & Lauren Schiebelhut, UC Merced1000 0.02 3.532 20.19

208 Pistachio Pistacia atlantica 434234208 Pistachio (Pistacia

atlantica)Richard Michelmore, UC Davis 600 0.2 N/A 26.3

209 Pistachio Pistacia integerrima 434235209 Pistachio (Pistacia

integerrima)Richard Michelmore, UC Davis 600 0.4 N/A 24.431

210 Pistachio Pistacia vera 55513 210 Pistachio (Pistacia vera) Salih Kafkas, Cukurova University 600 0.08 0.541 22.77

211 Pistachio Pistacia vera 55513 211 Pistachio (Pistacia vera) Salih Kafkas, Cukurova University 600 1.51 N/A 30.63

212 Ribwort Plantain Plantago lanceolata 39414212 Ribwort Plantain

(Plantago lanceolata)

Anna-Liisa Laine, Pezhman Safdari, University of Helsinki 500 0.07 1.039 6.096

213 European Flounder Platichthys flesus 8260213 European Flounder

(Platichthys flesus)Paolo Momigliano, University of Helsinki 700 0.61 9.628 24.295

214 Melissa Blue Plebejus melissa 155167214 Melissa Blue (Plebejus melissa)

Zach Gompert, Utah State University Alex Buerkle, University of Wyoming Chris Nice, Texas State University Matt Forister, University of Nevada, Reno James Fordyce, University of Tennessee, Knoxville

296 0.65 0.985 15.445

215 Indian mealmoth Plodia interpunctella 58824215 Indian mealmoth (Plodia interpunctella) Steve Paterson, University of Liverpool 388 1.27 5.09 N/A

216 Weedy CoralPocillopora

damicornis46731

216 Weedy Coral (Pocillopora damicornis)

Ross Cunning, Racheal A. Bay, Phil Gillette, Andrew C. Baker, Nikki Traylor-Knowles, University ofMiami 500 0.03 0.327 N/A


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

217 Common Wall Lizard Podarcis muralis 64176217 Common Wall Lizard

(Podarcis muralis)

Leif Andersson (Uppsala University), Miguel Carneiro (University of Porto) and Tobias Uller (Lund University) 1500 0.54 15.008 91.9

218 Guppy Poecilia reticulata 8081 218 Guppy (Poecilia reticulata)Felix Bemm, Max Planck Institute for Developmental Biology 739.5 4.25 27.3 N/A

219 Northern Paper Wasp Polistes fuscatus 30207219 Northern Paper Wasp

(Polistes fuscatus)

Sara E Miller, Andrew W Legan, Michael Henshaw, Katherine L Ostevik, Kieran Samuk, Floria M.K. Uy, H. Kern Reeve, Michael J Sheehan

220 4.8 N/A 9.116

220 Kerguelen CabbagePringlea

antiscorbutica203624

220 Kerguelen Cabbage

(Pringlea antiscorbutica)


221 Northern Sea Robin Prionotus carolinus 1266880221 Northern Sea Robin

(Prionotus carolinus)Julia Wucherpfennig, Stanford University 600 0.02 0.806 N/A

222 South African Rock HyraxProcavia capensis

capensis1973248

222 South African Rock Hyrax (Procavia capensis capensis) Harris Lewin, UC Davis 3000 0.04 9.108 N/A

223 Almond Prunus dulcis 3755 223 Almond (Prunus dulcis)Ohio State University, project under the supervision of Dr. Jonathan Fresnedo 240 0.0245 0.464 18.229

224 Sea GoldiePseudanthias

squamipinnis270578

224 Sea Goldie (Pseudanthias squamipinnis) Nathaniel Jue, Luis Rocha, Cal Academy 1000 0.03 7.459 27.947

225 Acorn Worm Ptychodera flava 63121225 Acorn Worm (Ptychodera flava) Dan Rokhsar, Okinawa Institute of Science and

Technology 1229 0.19 0.98 N/A

226 Leaf Rust Puccinia triticina 208348226 Leaf Rust (Puccinia

triticina)John Fellers, USDA 135 0.54 0.608 8.181

227 KudzuPueraria montana var

lobata3893

227 Kudzu (Pueraria montana var lobata) Ashley Egan 803 0.098 0.464 51.25

228 Mountain Lion Puma concolor 9696228 Mountain Lion (Puma

concolor)

Chris Willmers, University of California, Santa Cruz2519 0.07 28.65 N/A

229 Black headed Bulbul Pycnonotus atriceps 182895229 Black headed Bulbul

(Pycnonotus atriceps)

Frederick Sheldon, Louisiana State University 1300 0.11 17.538 N/A

230 African BullfrogPyxicephalus

adspersus30357

230 African Bullfrog

(Pyxicephalus adspersus)John Malone, University of Connecticut 1400 2.69 15.058 157.522

231 Caribou Rangifer tarandus 9870231 Caribou (Rangifer

tarandus)

Paul Wilson, Rebekah L. Horn (Trent University), Micheline Manseau (Environment Canada) 3000 0.04 11.8 N/A

232 Rat Rattus rattus 10117 232 Rat (Rattus rattus) Johannes Krause, Max Planck Institute 3000 0.04 29.699 110.504

233 African Striped Mouse Rhabdomys pumilio 121573233 African Striped Mouse (Rhabdomys pumilio) Ricardo Mallarino, Princeton University 3000 1.43 N/A 80.066

234 Apple Maggot Rhagoletis pomonella 28610234 Apple Maggot (Rhagoletis pomonella)

Jeffrey L. Feder, University of Notre Dame, Department of Biological Sciences, Scott P. Egan, Rice University, Department of Biosciences 1500 0.05 0.329 41.289

235 White breasted AntbirdRhegmatorhina

hoffmannsi468512

235 White breasted Antbird (Rhegmatorhina hoffmannsi)

Brant C. Faircloth, Louisiana State University 1000 0.09 11.806 N/A

236 Cane Toad Rhinella marina 8386236 Cane Toad (Rhinella

marina)

Grant Morahan, University of Western Australia4000 0.25 1.14 N/A

237 Lesser Grain BorerRhyzopertha

dominica92692

237 Lesser Grain Borer

(Rhyzopertha dominica)Brenda Oppert, USDA 500 1 7.01 N/A

238 Blackberry Rubus 23216 238 Blackberry (Rubus) BLANK 350 0.32 1.308 25.812

239 Raspberry Rubus 23216 239 Raspberry (Rubus)Only use stats not client information please!

300 0.1 1.982 20.147

240 Raspberry Rubus 23216 240 Raspberry (Rubus) BLANK 330 1.26 N/A 19.825

241 Heritage Raspberry Rubus idaeus 32247241 Heritage Raspberry (Rubus idaeus)

BLANK 330 1.02 N/A 15.196

242 Bakers YeastSaccharomyces

cerevisiae4932

242 Bakers Yeast (Saccharomyces cerevisiae)

Jamie Cate, University of California, Berkeley11 0.09 0.88 N/A

243 Sydney Rock Oyster Saccostrea glomerata 157728243 Sydney Rock Oyster

(Saccostrea glomerata)

Daniel Powell, Sankar Subramanian, Saowaros Suwansa-ard, Min Zhao, Wayne O?Connor, David Raftos, and Abigail Elizur, University of the Sunshine Coast

792 0.12 0.806 N/A


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

244 Choanoflagellate Salpingoeca rosetta 946362244 Choanoflagellate

(Salpingoeca rosetta)Laura Wetzel, UC Berkeley 60 0.64 N/A 1.702

245 Chia Salvia hispanica 49212 245 Chia (Salvia hispanica) Pankaj Jaiswal, Matthew Geniza, OSU 890 0.03 0.573 53.529

246 Tufted Capuchin Sapajus apella 9515246 Tufted Capuchin (Sapajus apella)

Jessica Lynch Alfaro, UCLA 2500 0.05 27.1 N/A

247 Tasmanian Devil Sarcophilus harrisii 9305247 Tasmanian Devil

(Sarcophilus harrisii)

Paul Hohenlohe, University of Idaho, Andrew Storfer, Washington State University

3000 1.85 7.751 N/A

248 Daisy Tree Scalesia gordillo 481597248 Daisy Tree (Scalesia

gordillo)

Tom Gilbert (Natural History Museum of Denmark) and Mike Martin (University of Copenhagen)

3500 0.01 0.073 N/A

249 Eastern Fence Lizard Sceloporus undulatus 8520249 Eastern Fence Lizard

(Sceloporus undulatus)Tonia Schwartz, Auburn University 2730 2.41 N/A 265.429

250 PlanarianSchmidtea

mediterranea79327

250 Planarian (Schmidtea

mediterranea)

Markus Grohme, Max Planck Institute of Molecular Cell Biology and Genetics https://www.ncbi.nlm.nih.gov/pubmed/2 9364871

782 0.71 3.68 N/A

251 Meadow Spikemoss Selaginella apoda 39585251 Meadow Spikemoss

(Selaginella apoda)

Exploring the Unknown Branches on the Tree of Life Barbara A. Ambrose, Tynisha L. Smalls, Dennis W. Stevenson, and Damon P. Little Funded by The Ambrose Monell Foundation

88 0.15 0.174 5.158

252 Coffeeweed Senna occidentalis 126820252 Coffeeweed (Senna

occidentalis)BLANK 560 0.08 1.583 24.213

253 Amberjack Seriola rivoliana 173321253 Amberjack (Seriola

rivoliana)Andrew Severin, Iowa State University 685 2.3 9.51 N/A

254 Eastern Bluebird Sialia sialis 172413254 Eastern Bluebird (Sialia sialis) Brant C. Faircloth, Louisiana State University

1000 0.05 31.121 N/A

255 White Mustard Sinapis alba 3728255 White Mustard (Sinapis alba) Isobel Parkin, Agriculture and Agri-Food Canada

500 4.54 N/A 21.176

256 Rice Weevil Sitophilus oryzae 7048256 Rice Weevil (Sitophilus oryzae)

Brenda Oppert, USDA 500 2.29 8.027 N/A

257 PotatoSolanum

bulbocastanum147425

257 Potato (Solanum

bulbocastanum)Kelly Vining, OSU 800 2.23 N/A 51.167

258 TomatoSolanum

lycopersicum4081

258 Tomato (Solanum

lycopersicum)

Prashant S Hosmani 1, Mirella Flores-Gonzalez 1, Henri Van de Geest 2, Gabino Sanchez-Perez 2, Sander Peters 2, Zhangjun Fei 3, James Giovannoni 3, Lukas A Mueller 1 and Surya Saha 1 1 Boyce Thompson Institute, Ithaca, NY USA 2 Plant Research International, Wageningen University, Wageningen, Netherlands 3 USDA ARS

950 5.53 N/A 65.518

259 TomatoSolanum

lycopersicum4081

259 Tomato (Solanum

lycopersicum)Susan Strickler (BTI) and Björn Usadel 1200 0.19 1.075 92.523

260 Hispaniolan Solenodon Solenodon paradoxus 79805260 Hispaniolan Solenodon (Solenodon paradoxus) Harris Lewin, UC Davis 3000 0.11 42.79 N/A

261 Prairie Cordgrass Spartina pectinata 65991261 Prairie Cordgrass (Spartina pectinata) Jose L. Gonzalez Hernandez, South Dakota State

University 1600 0.01 0.812 24.995

262 Tuatara Sphenodon punctatus 8508262 Tuatara (Sphenodon

punctatus)Neil Gemmel, Brigham Young University 4200 0.35 3.05 N/A

263 Great Hammerhead Shark Sphyrna mokarran 195334263 Great Hammerhead Shark (Sphyrna mokarran)

Mahmood Shivji, Michael J. Stanhope, Cornell University 3780 0.3 6.16 N/A

264 Fall ArmywormSpodoptera

frugiperda7108

264 Fall Armyworm

(Spodoptera frugiperda)Kiwoong Nam, INRA 350 0.9 N/A 13.151

265 Giant Rats Tail GrassSporobolus

pyramidalis391793

265 Giant Rats Tail Grass

(Sporobolus pyramidalis)Mel Oliver, U. of Missouri 1050 0.4 N/A 0.392

266 Fibrous Dropseed Sporobolus stapfianus 56623266 Fibrous Dropseed

(Sporobolus stapfianus)Mel Oliver, U. of Missouri 1050 1.02 N/A 2.892

267 Mexican Musk TurtleStaurotypus

triporcatus55537

267 Mexican Musk Turtle

(Staurotypus triporcatus)Nicole Valenzuela, Iowa State University 2700 4.02 N/A 111.34

268 Meerkat Suricata suricatta 37032268 Meerkat (Suricata

suricatta)

Jenny Tung (Duke University), Luis Barreiro, and Tim Clutton-Brock 2400 0.1 20.5 N/A


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

269 Pig Sus 9822 269 Pig (Sus) Tim Smith, USDA 2600 2.8 36.5 N/A

270 Tortula Moss Syntrichia caninervis 200751270 Tortula Moss (Syntrichia caninervis) Mel Oliver, U. of Missouri 390 0.03 1.131 20.46

271 Yellow Mealworm Tenebrio molitor 7067271 Yellow Mealworm

(Tenebrio molitor)Brenda Oppert, USDA 500 0.1 2.013 N/A

272 Demosponge Tethya wilhelma 463344272 Demosponge (Tethya

wilhelma)

Gert Wörheide and Sergio Vargas, LMU Munich, www.geobiology.eu 200 0.07 0.388 5.547

273 Kauai Long Jawed SpiderTetragnatha

kauaiensis156853

273 Kauai Long Jawed Spider (Tetragnatha kauaiensis)

Stefan Prost, Dmitri Petrov, UC Berkeley, Stanford University 1090 0.28 1.91 N/A

274 Tidepool Copepod Tigriopus californicus 6832274 Tidepool Copepod

(Tigriopus californicus)

Thiago Lima, Scripps Institution of Oceanography 240 0.3 1.692 15.44

275 Stick Insect Timema cristinae 61476275 Stick Insect (Timema

cristinae)Nosil et al. 2018 Science 1300 0.02 8.2 N/A

276 Malayan Lesser ChevrotainTragulus javanicus

ravus9849

276 Malayan Lesser Chevrotain (Tragulus javanicus ravus) Harris Lewin, UC Davis 3000 0.09 18.62 N/A

277 Wheat Triticum aestivum 4564277 Wheat (Triticum

aestivum)Simon Krattinger, University of Zurich 856 0.02 20.03 N/A

278 Wheat Chromosome 7 Triticum aestivum 4565278 Wheat Chromosome 7 (Triticum aestivum)

Sreya Ghosh (JIC, UK), Brande Wulff (JIC, UK), Miroslava Karafiátová (IEB, Czech Republic), Jaroslav Dole?el (IEB, Czech Republic)

1000 0.01 0.429 N/A

279 Parasitic Euglenoid Trypanosoma cruzi 5693279 Parasitic Euglenoid

(Trypanosoma cruzi)Rick Tarleton, UGA 100 0.22 N/A 0.916

280Common Bottlenose

DolphinTursiops truncatus 9739

280 Common Bottlenose Dolphin (Tursiops truncatus) Ben Neely, NIST 2500 0.03 26.6 N/A

281 Greater Prairie Chicken Tympanuchus cupido 9004281 Greater Prairie Chicken (Tympanuchus cupido) Ryan Phelan, Revive and Restore 897 0.14 12.2 N/A

282 BlueberryVaccinium

corymbosum69266

282 Blueberry (Vaccinium

corymbosum)Hamid Ashrafi, NCSU 600 0.42 1.236 50.381

283 BlueberryVaccinium

corymbosum69266

283 Blueberry (Vaccinium

corymbosum)Patrick P. Edger, Michigan State University 1900 2.68 N/A 36.941

284 Komodo Dragon Varanus komodoensis 61221284 Komodo Dragon (Varanus komodoensis) Barney Bishop, George Mason University 1600 0.04 23.2 N/A

285 VeronicaVeronica

panormitana195135

285 Veronica (Veronica

panormitana)

VW-trilateral, Volkswagen-Stiftung, Dirk Albach and Eike Mayland-Quellhorst, Biodiversity and Evolution of Plants 700 4.4 N/A 14.462

286 Verticillium WiltVerticillium

longisporum100787

286 Verticillium Wilt

(Verticillium longisporum)

Hossein Borhan, Agriculture and Agri-Food Canada70 0.03 N/A 1.26

287 Western Yellowjacket Vespula pensylvanica 30213287 Western Yellowjacket (Vespula pensylvanica)

Jessica Purcell, University of California-Riverside220 0.19 2.54 8.533

288 Alpaca Vicugna pacos 30538 288 Alpaca (Vicugna pacos)

Mark Richardson, Kylie Munyard, Larry Croft, Polina Perelman, Fahad Alshanbari, Matthew Jevit, Ahmed Tibary, Belinda Appleton, Terje Raudsepp

2100 9.86 24.02 N/A

289 Cowpea Vigna unguiculata 3917289 Cowpea (Vigna

unguiculata)

Guojing Li, Xinyi Wu and Pei Xu (Zhejiang Academy of Agricultural Sciences) 620 0.04 3.108 23.296

290 Cowpea Vigna unguiculata 3917290 Cowpea (Vigna

unguiculata)

Guojing Li, Xinyi Wu and Pei Xu (Zhejiang Academy of Agricultural Sciences) 620 0.04 2.39 35.743

291 Muscadine Vitis rotundifolia 103349291 Muscadine (Vitis

rotundifolia)

Florida Agricultural and Mechanical University (FAMU) /Center for Viticulture & Small Fruit Research

414 0.11 2.437 20.045

292 Cabernet SauvignonVitis vinifera

Cabernet Sauvignon29760

292 Grape Vine (Vitis vinifera Cabernet Sauvignon) Dario Cantu, University of California Davis 500 12.63 N/A 17.661

293 Common Grape VineVitis vinifera

Cabernet Franc29760

293 Grape Vine (Vitis vinifera Cabernet Franc) Dario Cantu, UC Davis 600 0.72 N/A 28.679

294 Common Grape VineVitis vinifera

Sauvignon Blanc29760

294 Grape Vine (Vitis vinifera Sauvignon Blanc) Dario Cantu, UC Davis 600 1.48 N/A 31.149

295 Marsabit Clawed Frog Xenopus borealis 8354295 Marsabit Clawed Frog (Xenopus borealis) Dan Rokhsar, UC Berkeley, et. al. 2100 4.3 138.72 N/A


(Mbp)

Input

Scaffold N50 (Mbp)


Scaffold N50 (Mbp)


Scaffold N50 (Mbp)

296 African Clawed Frog Xenopus laevis 8355296 African Clawed Frog

(Xenopus laevis)Dan Rokhsar, UC Berkeley 3100 3.4 8.8 32.8

297 Swordless SwordtailXiphophorus

birchmanni32469

297 Swordless Swordtail

(Xiphophorus birchmanni)

Molly Schumer, Harvard University, Gil Rosenthal, and Manfred Schartl 750 2.01 2.762 32

298 Highland Swordtail Xiphophorus malinche 32476298 Highland Swordtail

(Xiphophorus malinche)

Molly Schumer, Harvard University, Gil Rosenthal, and Manfred Schartl 750 1.9 7.196 31.071

299 Californian Sea LionZalophus

californianus9704

299 Californian Sea Lion

(Zalophus californianus)Claire Peart, Uppsala University 3150 26.13 64.174 138.137

300 Maize Zea diploperennis 4576 300 Maize (Zea diploperennis) Jeff Ross-Ibarra, UC Davis 3600 0.07 0.986 N/A

301 MaizeZea mays ssp

Mexicana4577

301 Maize (Zea mays ssp

Mexicana)

Jeffrey Ross-Ibarra, University of California2000 0.02 0.104 N/A

Dovetail TreeOfLife Vector corrected · 2021. 5. 27. · 068 Coffee (Coffea arabica) 120 Soybean...

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