Allegato 2
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Transcript of Allegato 2
Allegato 2
Schema della struttura del gene TRP53
Legenda:
5' downstream sequenceExon
..........gggggttgctgggattgggactttcccctcccacgtgctcaccctggcta
Lunghezza(nt)
1 128 AAGTTCTGTAGCTTCAGTTCATTGGGACCATCCTGGCTGTAGGTAGCGACTACAGTTAGGGGGCACCTAGCATTCAGGCCCTCATCCTCCTCCTTCCCAGCAGGGTGTCACGCTTCTCCGAAGACTGG
Intron 1-2
6,375
gtaagtaattgatgagcgtgacgagacctctcggtcactggctctctccgtttgcatccataaaactagagaaaaccgtggggtttgggggtggggcagt........................................attctaccctttcctataagccataggggtttgtttgtttgtatgttttttaattgacaagttatgcatccatacagtacacaatctcttctctctacag
2 83 ATGACTGCCATGGAGGAGTCACAGTCGGATATCAGCCTCGAGCTCCCTCTGAGCCAGGAGACATTTTCAGGCTTATGGAAACT
Intron 2-3
283 gtgagtggatctttttggggcccttaagatacatcccgccatacctgtatcctccccttgcctgagagaaacaaaaacagtagtgttcaaacatggtatg........................................tgactacatagcaagttggaggccagcctgggataagtgagattctgtcttcaaaaaatggaaggaaatcaggaactaactctctgctcttgttttccag
3 22 ACTTCCTCCAGAAGATATCCTG Intron
3-493 gtaaggcccagagcagaaagggacttgggctttggtgttgggtggtaggctgagaacac
agtcctgagggttcttctttgtcccatccacag4 261 CCATCACCTCACTGCATGGACGATCTGTTGCTGCCCCAGGATGTTGAGGAGTTTTTTGA
AGGCCCAAGTGAAGCCCTCCGAGTGTCAGGAGCTCCTGCAGCACAGGACCCTGTCACCGAGACCCCTGGGCCAGTGGCCCCTGCCCCAGCCACTCCATGGCCCCTGTCATCTTTTGTCCCTTCTCAAAAAACTTACCAGGGCAACTATGGCTTCCACCTGGGCTTCCTGCAGTCTGGGACAGCCAAGTCTGTTATGTGCACG
USR – IFOM – ANSAS“LO STUDENTE RICERCATORE - Anno 2010 – Relazione finale scientifica dello studente
Struttura del gene Trp53 ( Mus Musculus )
Regione intronica
Regione esonica tradotta
Regione esonica non tradotta
Allegato 2
Intron 4-5
731 gtgagtgggccccggggagttgtctttcgtgtgacctttcaatgcctctttttctctgtctagatttgggggttcctcttcagcctgtagactgtgcctc........................................tccaatggtgcttggacaatgtgtttcattagttccccaccttgacacctgatcgttactcggcttgtccccgacctccgttctctctcctctcttccag
5 184 TACTCTCCTCCCCTCAATAAGCTATTCTGCCAGCTGGCGAAGACGTGCCCTGTGCAGTTGTGGGTCAGCGCCACACCTCCAGCTGGGAGCCGTGTCCGCGCCATGGCCATCTACAAGAAGTCACAGCACATGACGGAGGTCGTGAGACGCTGCCCCCACCATGAGCGCTGCTCCGATGGTGATG
Intron 5-6
78 gtaagccctcaacaccgcctgtggggttaggactggcagcctcccatctcccggcttctgacttattcttgctcttag
6 113 GCCTGGCTCCTCCCCAGCATCTTATCCGGGTGGAAGGAAATTTGTATCCCGAGTATCTGGAAGACAGGCAGACTTTTCGCCACAGCGTGGTGGTACCTTATGAGCCACCCGAG
Intron 6-7
402 gtctgtaattttgttttggtttgtgcgtcttagagacagttgactccagcctagactgatgttgactttctagcaacccgtttgcctcaccctcctgagt........................................tgaaacttattagaggctatagccagccattcccggctgctgcaggtcacctgtagtgaggtagggagcgacttcacctggatcctgtgtcttcccccag
7 110 GCCGGCTCTGAGTATACCACCATCCACTACAAGTACATGTGTAATAGCTCCTGCATGGGGGGCATGAACCGCCGACCTATCCTTACCATCATCACACTGGAAGACTCCAG
Intron 7-8
322 gtaggaaggcgcgtggtaggttaggttagcctgtttcttccccagcttctgcctgtttctgttccacgagtcccgccccctaccacatgcccaacgctct........................................aagaggggttgggaacaggtgggggcctagtttacacacagtcaggatggggcccagctttcttactgccttgtgctggtccttttcttgtcccggatag
8 137 TGGGAACCTTCTGGGACGGGACAGCTTTGAGGTTCGTGTTTGTGCCTGCCCTGGGAGAGACCGCCGTACAGAAGAAGAAAATTTCCGCAAAAAGGAAGTCCTTTGCCCTGAACTGCCCCCAGGGAGCGCAAAGAGAG
Intron 8-9
79 gtacgcaggcgggaccaaggaggcggaggagcctgttgagcttcaccccaaagtcacctcttgctctctccttccacag
9 74 CGCTGCCCACCTGCACAAGCGCCTCTCCCCCGCAAAAGAAAAAACCACTTGATGGAGAGTATTTCACCCTCAAG
Intron 9-10
793 gtaccaaggctggagagtcgcatgccagagacaagctgtacccattattgcctctgtctctcgcatgtataaaatagtgttattagcaggttgccaggtc........................................ttaagttgggaaccaactttcagaaagaaagttgttaaaatcgtgaaagtggttgtgtgaccttgtccagtgcttccatctcacttcatctctgctgcag
10 107 ATCCGCGGGCGTAAACGCTTCGAGATGTTCCGGGAGCTGAATGAGGCCTTAGAGTTAAAGGATGCCCATGCTACAGAGGAGTCTGGAGACAGCAGGGCTCACTCCAG
Intron 10-11
587 gtaagtggcctggggcagcgcctgcctgtggtgctctacccagacctccctccagctcagcctttgtagtgaaagataaaaaccccaccctgctagatgc........................................tcagcctccagcctagagccttccaagccttgatcaagga
USR – IFOM – ANSAS“LO STUDENTE RICERCATORE - Anno 2010 – Relazione finale scientifica dello studente
Allegato 2
ggaaagcccaaactgctagctcccatcacttcatccctccccttttctgtcttcctatag
11 523 CTACCTGAAGACCAAGAAGGGCCAGTCTACTTCCCGCCATAAAAAAACAATGGTCAAGAAAGTGGGGCCTGACTCAGACTGACTGCCTCTGCATCCCGTCCCCATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCCCTTCTGCTGCCTTTTTTACCTTGTAGCTAGGGCTCAGCCCCCTCTCTGAGTAGTGGTTCCTGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCCTGGCACCTACAATGAAATCTCACCCTACCCCACACCCTGTAAGATTCTATCTTGGGCCCTCATAGGGTCCATATCCTCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTGCATTTATCCACCCCCCACCCTGTCTCCCTCTTTTTTTTTTTTTTACCCCTTTTTATATATCAATTTCCTATTTTACAATAAAATTTTGTTATCACTT
3' downstream sequence
atatggttttgagaggttgatatcagcataagctgtctgggcccccaggg..........
USR – IFOM – ANSAS“LO STUDENTE RICERCATORE - Anno 2010 – Relazione finale scientifica dello studente
Le sequenze in minuscolo verde corrispondono alle regioni non tradotte alle estremità del gene (UTRs)Le sequenze in minuscolo blu corrispondono alle regioni introniche situate tra gli esoniLe sequenze in maiuscolo nero corrispondono alle regioni esoniche tradotteLe sequenze in maiuscolo viola corrispondono alle regioni esoniche non tradotte
La sequenza codificante inizia con lo start codon ATG (Met) e termina con lo stop codon TGA